EpiNow2 Stan Functions
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EpiNow2 Stan Functions

EpiNow2 is an R package for estimating the time-varying reproduction number, growth rate, and doubling time from right truncated data.

The package uses Stan for the core modelling and R for pre-processing and post-processing of inputs and outputs.

This website covers the documentation of the Stan code/functions (See the next tab).

Documentation structure

The documentation is organized by function groups, with related functions grouped together:

Each function page includes:

  • A brief description of the function's purpose
  • Detailed explanation of the function's behavior
  • Parameter descriptions with standardized documentation for common parameters
  • Return value information

EpiNow2 website

Note
Click here to return to the main EpiNow2 website.