EpiNow2 Stan Functions
EpiNow2 Stan Functions

License: MIT

EpiNow2 is an R package for estimating the time-varying reproduction number, growth rate, and doubling time from right truncated data.

The package uses Stan for the core modelling and R for pre-processing and post-processing of inputs and outputs.

This website covers the documentation of the Stan code/functions (See the next tab).

Documentation structure

The documentation is organized by function groups, with related functions grouped together:

Each function page includes:

  • A brief description of the function's purpose
  • Detailed explanation of the function's behavior
  • Parameter descriptions
  • Return value information
  • Call and caller graphs
  • Collaboration graphs
  • Referencing and referenced functions

EpiNow2 main website

Click here to return to the main EpiNow2 website.