EpiNow 0.3.0

  • Added documentation.
  • Added GitHub Actions for documentation and CRAN check.
  • Added function to map from simulated cases by date of infection to cases by date of report.
  • Added function examples
  • Update README with introduction, quick start guide, and contribution information
  • Added a getting started vignette.
  • Improve CRAN compliance and cleaned up CRAN check results

EpiNow 0.2.0

  • Time-varying window for Rt estimation.
  • Refactored all code in data.table.
  • Refactored code base.
  • Added mapping from onset cases to infection with upscaling to account for additional truncation.
  • Added minimal example to all functions
  • Added an approximate mapping for reporting delay that has an adaptive case threshold.
  • Switched to using a generation time estimate rather than a serial interval (see `data-raw/ganyani-generation-time.rs)

EpiNow 0.1.0

  • Added a NEWS.md file to track changes to the package.
  • Extract tooling from global nowcasts.
  • Parameterised the report to be generalised.
  • Added a regional pipeline and made a national summary nowcast optional.
  • Added summary and plotting functions built to work from saved results.
  • Added a function to summarise results across regions